TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= query SelS_C.intestinalis.fa
         (204 letters)

Database: A.taiwanensis/genome.fa 
           5379 sequences; 6,149,411 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJQ01005173.1| Ascogregarina taiwanensis CLRANP133-E04.b1.ab...    32   0.052
gb|ABJQ01003180.1| Ascogregarina taiwanensis Contig3514, whole g...    31   0.088
gb|ABJQ01003267.1| Ascogregarina taiwanensis Contig3602, whole g...    30   0.15 
gb|ABJQ01004483.1| Ascogregarina taiwanensis CLRanP145-B09.b1.ab...    28   0.75 
gb|ABJQ01003401.1| Ascogregarina taiwanensis Contig3742, whole g...    26   2.8  
gb|ABJQ01001132.1| Ascogregarina taiwanensis Contig1300, whole g...    26   3.7  
gb|ABJQ01003824.1| Ascogregarina taiwanensis CLRanP122-H05.g1.ab...    25   4.8  
gb|ABJQ01003148.1| Ascogregarina taiwanensis Contig3481, whole g...    25   4.8  
gb|ABJQ01002469.1| Ascogregarina taiwanensis Contig2775, whole g...    25   4.8  
gb|ABJQ01000612.1| Ascogregarina taiwanensis Contig731, whole ge...    25   4.8  
gb|ABJQ01000285.1| Ascogregarina taiwanensis Contig365, whole ge...    25   4.8  
gb|ABJQ01003322.1| Ascogregarina taiwanensis Contig3659, whole g...    25   6.3  
gb|ABJQ01003156.1| Ascogregarina taiwanensis Contig3490, whole g...    25   6.3  
gb|ABJQ01001832.1| Ascogregarina taiwanensis Contig2076, whole g...    25   6.3  
gb|ABJQ01005163.1| Ascogregarina taiwanensis CLRANP133-D12.g1.ab...    25   8.3  
gb|ABJQ01003437.1| Ascogregarina taiwanensis CLRanP90-E01.b1.ab1...    25   8.3  
gb|ABJQ01001103.1| Ascogregarina taiwanensis Contig1267, whole g...    25   8.3  

>gb|ABJQ01005173.1| Ascogregarina taiwanensis CLRANP133-E04.b1.ab1, whole genome
           shotgun sequence
          Length = 803

 Score = 32.0 bits (71), Expect = 0.052
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 18/105 (17%)
 Frame = +2

Query: 116 EERLREQEEQKRMQK-----INDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNK-- 168
           EER R + EQ+RMQ+      ++  A++A + + +T K+  +K    +A Q  +++ K  
Sbjct: 308 EERRRYEAEQERMQQELARVEDERRAVEAARERCETEKERMRK--DAEALQEQLRQLKEQ 481

Query: 169 -----------ESKPLRSSDFSPLGGGPSNSARWRPGNSRPSAGG 202
                      E+K  ++S+     GG        P   RP AGG
Sbjct: 482 AEADRRRAEEAETKRRKTSEGGGFCGGCGGGTESPPPTGRPPAGG 616


>gb|ABJQ01003180.1| Ascogregarina taiwanensis Contig3514, whole genome shotgun sequence
          Length = 1814

 Score = 31.2 bits (69), Expect = 0.088
 Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
 Frame = +2

Query: 64  IEKSVKNLFGRRKTYYDDTENMTPEQVEARS---VAMERARKKLQDRHDAAAREHEERLR 120
           +++ V  +  RR   +   E++  E +  R      +E  R +L+D  D     +E+++ 
Sbjct: 740 LQRHVPTVCRRRSHLFLRFESLKSESLVGRKRQRKQVELPRSRLEDFLD-----YEDQIE 904

Query: 121 EQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLR 174
               +K+          K   T  K  KK  +KP  +++ +S ++RN ES+  R
Sbjct: 905 PPAAKKKKGSKGSDSKAKMTATAPKPKKK--KKPAADESVKSDVRRNVESRSAR 1060


>gb|ABJQ01003267.1| Ascogregarina taiwanensis Contig3602, whole genome shotgun sequence
          Length = 4617

 Score = 30.4 bits (67), Expect = 0.15
 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 70  NLFGRRKTYYDDTENMT-PEQVEARSVAMERARKKLQDRHDAAAREHE 116
           ++F    TYY  T N+T PE+  ARSV    A +K     DAAAR  E
Sbjct: 672 DIFHSHITYYPTTFNLTRPEKTRARSVGRSIALRKCPS-CDAAARRAE 532


>gb|ABJQ01004483.1| Ascogregarina taiwanensis CLRanP145-B09.b1.ab1, whole genome
           shotgun sequence
          Length = 849

 Score = 28.1 bits (61), Expect = 0.75
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = -2

Query: 146 TSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPLGGGPSNSARWRPGNSRPS 199
           T  +  Q+P     T  H++R ++S       F   G  P N+ RWR  NSRPS
Sbjct: 245 THPRPTQRPRRRNFTT*HVQRLEKSSVGS*GHFGA*GLTP-NAWRWRAKNSRPS 87


>gb|ABJQ01003401.1| Ascogregarina taiwanensis Contig3742, whole genome shotgun sequence
          Length = 1165

 Score = 26.2 bits (56), Expect = 2.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 182 GGGPSNSARWRPGNSRPSAG 201
           GGGP++   W PG+ R + G
Sbjct: 163 GGGPAHGHGWGPGHGRATEG 222


>gb|ABJQ01001132.1| Ascogregarina taiwanensis Contig1300, whole genome shotgun sequence
          Length = 1385

 Score = 25.8 bits (55), Expect = 3.7
 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +1

Query: 80  DDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLR------EQEEQKRMQKIND 133
           DD   +  +Q  AR    +  R+  Q RH+  AREH E  R      +Q+E +    ++ 
Sbjct: 100 DDVAAVGVQQDHARGG--DGQRQPEQRRHEQHAREHRELQRPGHVHGQQDEHEARGDVHG 273

Query: 134 HDALKAGKTQSKTSKKLD 151
           H  +   + Q +  ++ D
Sbjct: 274 HQQVDEPQRQRQHHQRHD 327


>gb|ABJQ01003824.1| Ascogregarina taiwanensis CLRanP122-H05.g1.ab1, whole genome
           shotgun sequence
          Length = 833

 Score = 25.4 bits (54), Expect = 4.8
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 144 SKTSKKLDQK-PDPNQATQSHIKRNKESKPLRSSDFSPLGGG 184
           +K+SK L  K P      + H++   +S P+R S F  LGGG
Sbjct: 796 AKSSKDLAVKLPHIPSKCRKHLR---DSLPMRQSTFQSLGGG 680


>gb|ABJQ01003148.1| Ascogregarina taiwanensis Contig3481, whole genome shotgun sequence
          Length = 866

 Score = 25.4 bits (54), Expect = 4.8
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 7/36 (19%)
 Frame = +2

Query: 174 RSSDFSPLGGGPSNSARWRPG-------NSRPSAGG 202
           R  +  P+G G +  ARW PG       ++RP  GG
Sbjct: 371 RVGELRPMGRGCAARARWGPGRAVGGWRHARPPHGG 478


>gb|ABJQ01002469.1| Ascogregarina taiwanensis Contig2775, whole genome shotgun sequence
          Length = 2117

 Score = 25.4 bits (54), Expect = 4.8
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +1

Query: 173 LRSSDFSP-LGGGPSNSARWRPGNSRPS 199
           L SS FS    G P+ + RWRPGN + S
Sbjct: 82  LNSSGFSAETRGMPTIARRWRPGNVKLS 165


>gb|ABJQ01000612.1| Ascogregarina taiwanensis Contig731, whole genome shotgun sequence
          Length = 772

 Score = 25.4 bits (54), Expect = 4.8
 Identities = 8/31 (25%), Positives = 22/31 (70%)
 Frame = +3

Query: 101 RKKLQDRHDAAAREHEERLREQEEQKRMQKI 131
           RKK+  +HD + RE E++  +++++++ + +
Sbjct: 579 RKKMSKKHDNSRREKEKQQNKKKKRRKRRPL 671


>gb|ABJQ01000285.1| Ascogregarina taiwanensis Contig365, whole genome shotgun sequence
          Length = 705

 Score = 25.4 bits (54), Expect = 4.8
 Identities = 16/67 (23%), Positives = 35/67 (52%)
 Frame = -1

Query: 87  PEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKT 146
           PE+   R    E   ++   R    ARE E+  RE+EE++R ++  + +  +  + ++K 
Sbjct: 576 PERKRKRERESEERERERGRRERERAREREKE-REKEERER-ERERESERARERERETKR 403

Query: 147 SKKLDQK 153
            +K +++
Sbjct: 402 EEKREER 382


>gb|ABJQ01003322.1| Ascogregarina taiwanensis Contig3659, whole genome shotgun sequence
          Length = 5032

 Score = 25.0 bits (53), Expect = 6.3
 Identities = 16/65 (24%), Positives = 30/65 (46%)
 Frame = -3

Query: 90   VEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKK 149
            +E R   + R  + +QD +  A      RLR++E Q   ++ +      +G T S+   +
Sbjct: 2885 LERRRDRLARHEEYMQDGYHVALANIRRRLRKEECQYPSRRASGDTDDSSGSTPSEIDVQ 2706

Query: 150  LDQKP 154
              Q+P
Sbjct: 2705 EMQRP 2691


>gb|ABJQ01003156.1| Ascogregarina taiwanensis Contig3490, whole genome shotgun sequence
          Length = 2875

 Score = 25.0 bits (53), Expect = 6.3
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 190  RWRPGNSRPSAGG 202
            RWRPG  R S GG
Sbjct: 2345 RWRPGKRRASTGG 2383


>gb|ABJQ01001832.1| Ascogregarina taiwanensis Contig2076, whole genome shotgun sequence
          Length = 513

 Score = 25.0 bits (53), Expect = 6.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 179 SPLGGGPSNSARWRPGNSRPSAG 201
           +P GGGP    RWR   +  + G
Sbjct: 164 APCGGGPVRPMRWRGARAERTGG 96


>gb|ABJQ01005163.1| Ascogregarina taiwanensis CLRANP133-D12.g1.ab1, whole genome
           shotgun sequence
          Length = 340

 Score = 24.6 bits (52), Expect = 8.3
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 187 NSARWRPGNSRPS 199
           +SA W PG+SRPS
Sbjct: 135 HSAAWTPGDSRPS 173


>gb|ABJQ01003437.1| Ascogregarina taiwanensis CLRanP90-E01.b1.ab1, whole genome shotgun
           sequence
          Length = 886

 Score = 24.6 bits (52), Expect = 8.3
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 182 GGGPSNSARWRPGNSRPSA 200
           G GP  SAR RP   RP+A
Sbjct: 676 GPGPPRSARGRPAVRRPAA 620


>gb|ABJQ01001103.1| Ascogregarina taiwanensis Contig1267, whole genome shotgun sequence
          Length = 1146

 Score = 24.6 bits (52), Expect = 8.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 183 GGPSNSARWRPGNSRPSAG 201
           G P + ARWRPG S    G
Sbjct: 128 GCPRSPARWRPGRSTLGRG 72


  Database: A.taiwanensis/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 6,149,411
  Number of sequences in database:  5379
  
Lambda     K      H
   0.312    0.129    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,313,467
Number of Sequences: 5379
Number of extensions: 16025
Number of successful extensions: 123
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of query: 204
length of database: 2,049,803
effective HSP length: 83
effective length of query: 121
effective length of database: 1,603,346
effective search space: 194004866
effective search space used: 194004866
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 51 (24.3 bits)